Volume 2; 2014

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Research Paper
Meta-Analysis of Candidate Gene Effects Using Bayesian Parametric and Non-Parametric Approaches
Xiao-Lin Wu, Daniel Gianola, Guilherme J. M. Rosa, Kent A. Weigel
J. Genomics 2014; 2: 1-19. doi:10.7150/jgen.5054
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Research Paper
Analysis of Diversity and Linkage Disequilibrium Mapping of Agronomic Traits on B-Genome of Wheat
Haixia Yu, Zhiying Deng, Changfen Xiang, Jichun Tian
J. Genomics 2014; 2: 20-30. doi:10.7150/jgen.4089
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Review
Molecular Heterogeneities of Adipose Depots - Potential Effects on Adipose-Muscle Cross-Talk in Humans, Mice and Farm Animals
Katrin Komolka, Elke Albrecht, Klaus Wimmers, Jennifer J. Michal, Steffen Maak
J. Genomics 2014; 2: 31-44. doi:10.7150/jgen.5260
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Research Paper
Renin Gene Polymorphisms in Bangladeshi Hypertensive Population
Rownock Afruza, Laila N Islam, Sajal Banerjee, Md. Mahbub Hassan, Fumiaki Suzuki, AHM Nurun Nabi
J. Genomics 2014; 2: 45-53. doi:10.7150/jgen.5193
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Short Research Communication
Characterization of the Asian Citrus Psyllid Transcriptome
Justin Reese, Matthew K. Christenson, Nan Leng, Surya Saha, Brandi Cantarel, Magdalen Lindeberg, Cecilia Tamborindeguy, Justin MacCarthy, Daniel Weaver, Andrew J. Trease, Steven V. Ready, Vincent M. Davis, Courtney McCormick, Christian Haudenschild, Shunsheng Han, Shannon L. Johnson, Kent S. Shelby, Hong Huang, Blake R. Bextine, Robert G. Shatters, David G. Hall, Paul H. Davis, Wayne B. Hunter
J. Genomics 2014; 2: 54-58. doi:10.7150/jgen.7692
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Short Research Communication
No Variation at 29 Microsatellites in the Genome of Jatropha curcas
Gen Hua Yue, Loong Chueng Lo, Fei Sun, Su Ying Cao, Cheng Xin Yi, Yan Hong, Wei Bang Sun
J. Genomics 2014; 2: 59-63. doi:10.7150/jgen.7435
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Short Research Communication
A Novel Dataset for Identifying Sex-Biased Genes in Drosophila
Nicholas W. VanKuren, Maria D. Vibranovski
J. Genomics 2014; 2: 64-67. doi:10.7150/jgen.7955
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Review
The Sex Chromosomes of Frogs: Variability and Tolerance Offer Clues to Genome Evolution and Function
Jacob W. Malcom, Randal S. Kudra, John H. Malone
J. Genomics 2014; 2: 68-76. doi:10.7150/jgen.8044
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Review
Chromosome Imbalance as a Driver of Sex Disparity in Disease
Lara K. Abramowitz, Stéphanie Olivier-Van Stichelen, John A. Hanover
J. Genomics 2014; 2: 77-88. doi:10.7150/jgen.8123
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Research Paper
Enly: Improving Draft Genomes through Reads Recycling
Marco Fondi, Valerio Orlandini, Giorgio Corti, Marco Severgnini, Marco Galardini, Alessandro Pietrelli, Fabio Fuligni, Michele Iacono, Ermanno Rizzi, Gianluca De Bellis, Renato Fani
J. Genomics 2014; 2: 89-93. doi:10.7150/jgen.7298
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Review
How Do Y-Chromosomes Modulate Genome-Wide Epigenetic States: Genome Folding, Chromatin Sinks, and Gene Expression
Flávio O. Francisco, Bernardo Lemos
J. Genomics 2014; 2: 94-103. doi:10.7150/jgen.8043
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Review
Meiotic Sex Chromosome Inactivation in Drosophila
Maria D. Vibranovski
J. Genomics 2014; 2: 104-117. doi:10.7150/jgen.8178
[Abstract] [Full text] [PDF] [PubMed] [PMC]


Short Research Communication
Draft Genome Sequence of the Extremely Halophilic Phototrophic Purple Sulfur Bacterium Halorhodospira halochloris
Kumar Saurabh Singh, Jared Kirksey, Wouter D. Hoff, Ratnakar Deole
J. Genomics 2014; 2: 118-120. doi:10.7150/jgen.9123
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Research Paper
Characterization of Distinct Classes of Differential Gene Expression in Osteoblast Cultures from Non-Syndromic Craniosynostosis Bone
Monica L. Rojas-Peña, Rene Olivares-Navarrete, Sharon Hyzy, Dalia Arafat, Zvi Schwartz, Barbara D. Boyan, Joseph Williams, Greg Gibson
J. Genomics 2014; 2: 121-130. doi:10.7150/jgen.8833
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Research Paper
Urochordate serpins Are Classified into Six Groups Encoded by Exon-Intron Structures, Microsynteny and Bayesian Phylogenetic Analyses
Abhishek Kumar, Anita Bhandari
J. Genomics 2014; 2: 131-140. doi:10.7150/jgen.9437
[Abstract] [Full text] [PDF] [PubMed] [PMC]


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Research Paper
De novo Assembly and Analysis of the Northern Leopard Frog Rana pipiens Transcriptome
Matthew K. Christenson, Andrew J. Trease, Lakshmi-Prasad Potluri, Andrew J. Jezewski, Vincent M. Davis, Lindsey A. Knight, Alan S. Kolok, Paul H. Davis
J. Genomics 2014; 2: 141-149. doi:10.7150/jgen.9760
[Abstract] [Full text] [PDF] [PubMed] [PMC]