Permanent draft genome sequence of <i>Bradyrhizobium vignae,</i> strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal

NIANG, Diariatou; GUEDDOU, Abdellatif; NIANG, Nogaye; NZEPANG, Darius; SAMBOU, Aissatou; DIOUF, Adama; ZAIYA, Arlette Z; CISSOKO, Maimouna; GULLY, Djamel; NGUEPJOP, Joel-Romaric; SVISTOONOFF, Sergio; FONCEKA, Daniel; HOCHER, Valérie; DIOUF, Diégane; FALL, Saliou; TISA, Louis S.

doi:10.7150/jgen.88302

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J Genomics 2023; 11:52-57. doi:10.7150/jgen.88302 This volume Cite

Short Research Paper

Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal

Diariatou NIANG^1,2,3, Abdellatif GUEDDOU⁴, Nogaye NIANG^1,2,3, Darius NZEPANG^1,2,4, Aissatou SAMBOU⁵, Adama DIOUF^1,3, Arlette Z ZAIYA^3,5,9, Maimouna CISSOKO^3,6, Djamel GULLY⁶, Joel-Romaric NGUEPJOP^5,6,7, Sergio SVISTOONOFF⁶, Daniel FONCEKA^5,6,7, Valérie HOCHER^3,6, Diégane DIOUF^3,8, Saliou FALL^2,3, Louis S. TISA^4✉

1. Université Cheikh Anta Diop (UCAD/FST), Département de Biologie Végétale, École doctorale Sciences de la Vie, de la Santé et de l'Environnement (EDSEV), B.P.: 5005 Dakar-Fann, Senegal.
2. Institut Sénégalais de Recherche Agricole (ISRA), Laboratoire National de Recherches sur la Productions Végétales (LNRPV), Campus ISRA-IRD de Bel air, Dakar.
3. Laboratoire Commun de Microbiologie (LCM: IRD - ISRA - UCAD), B. P. 3120, Campus ISRA-IRD de Bel air, Dakar.
4. Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, New Hampshire, USA.
5. Institut Sénégalais de Recherche Agricole (ISRA), Centre d'Etudes Régional pour l'Amélioration de l'Adaptation à la Sécheresse, CERAAS - Route de Khombole, BP3320 Thiès, Senegal.
6. Institut de Recherche pour le Développement (IRD), UMR PHIM IRD/INRAE/CIRAD/U.Montpellier/Institut Agro , Montpellier, France.
7. CIRAD, UMRAGAP, CIRAD/Univ Montpellier/ INRAE, Institut Agro, F-34398 Montpellier, France.
8. Université du Sine Saloum El Hadj Ibrahima Niass (USSEIN), UFR Sciences sociales et environnementales, Centre d'Excellence Africain "Agriculture pour la Sécurité Alimentaire et Nutritionnelle" (CEA-AGRISAN), Kaolack.
9. Present address: Institute of Agricultural Research for Development (IRAD), Yaounde, Cameroon.

Citation:

NIANG D, GUEDDOU A, NIANG N, NZEPANG D, SAMBOU A, DIOUF A, ZAIYA AZ, CISSOKO M, GULLY D, NGUEPJOP JR, SVISTOONOFF S, FONCEKA D, HOCHER V, DIOUF D, FALL S, TISA LS. Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal. J Genomics 2023; 11:52-57. doi:10.7150/jgen.88302. https://www.jgenomics.com/v11p0052.htm

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Abstract

A new Bradyrhizobium vignae strain called ISRA400 was isolated from groundnut (Arachis hypogaea L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the Arachis hypogaea variety Fleur11. These findings suggest the potential of Bradyrhizobium vignae strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop.

Keywords: Bradyrhizobium, Arachis hypogaea, biological nitrogen fixation, genome, symbiosis

Citation styles

APA

NIANG, D., GUEDDOU, A., NIANG, N., NZEPANG, D., SAMBOU, A., DIOUF, A., ZAIYA, A.Z., CISSOKO, M., GULLY, D., NGUEPJOP, J.R., SVISTOONOFF, S., FONCEKA, D., HOCHER, V., DIOUF, D., FALL, S., TISA, L.S. (2023). Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal. Journal of Genomics, 11, 52-57. https://doi.org/10.7150/jgen.88302.

ACS

NIANG, D.; GUEDDOU, A.; NIANG, N.; NZEPANG, D.; SAMBOU, A.; DIOUF, A.; ZAIYA, A.Z.; CISSOKO, M.; GULLY, D.; NGUEPJOP, J.R.; SVISTOONOFF, S.; FONCEKA, D.; HOCHER, V.; DIOUF, D.; FALL, S.; TISA, L.S. Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal. J. Genomics 2023, 11, 52-57. DOI: 10.7150/jgen.88302.

NLM

CSE

NIANG D, GUEDDOU A, NIANG N, NZEPANG D, SAMBOU A, DIOUF A, ZAIYA AZ, CISSOKO M, GULLY D, NGUEPJOP JR, SVISTOONOFF S, FONCEKA D, HOCHER V, DIOUF D, FALL S, TISA LS. 2023. Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal. J Genomics. 11:52-57.

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